Publications by Type: Journal Article

N. Hao, Behar, M., Elston, T. C., and Dohlman, H. G., “(2007),” Systems biology analysis of {G} protein and {MAP} kinase signaling in yeast, {Oncogene}, vol. 26, pp. 3254–3266, Submitted.
M. Behar, Dohlman, H. G., and Elston, T. C., “(2007),” Kinetic insulation as an effective mechanism for achieving pathway specificity in intracellular signaling networks, {PNAS}, vol. 104, pp. 16146–16151, Submitted.
N. Hao, Nayak, S., Behar, M., Shanks, R., Nagiec, M., Errede, B., Hasty, J., Elston, T. C., and Dohlman, H. G., “(2007),” Regulation of cell signaling dynamics by the protein kinase-scaffold {Ste}5, {Mol} {Cell}, vol. 30, pp. 649–56, Submitted.
N. Hao, Behar, M., Parnell, S. C., Torres, M. P., Borchers, C. H., Elston, T. C., and Dohlman, H. G., “(2007),” A Systems-Biology Analysis of Feedback Inhibition in the Sho1 Osmotic-Stress-Response Pathway, Curr Biol, vol. 17, pp. 659–667, Submitted.
M. Behar, Hao, N., Dohlman, H. G., and Elston, T. C., “(2007),” Mathematical and {Computational} {Analysis} of {Adaptation} via {Feedback} {Inhibition} in {Signal} {Transduction} {Pathways}, {Biophys} {J}, vol. 93, pp. 806–821, Submitted.
Y. Feng, Oden, J. T., and Rylander, M. N., “2008, " A Two-State Cell Damage Model Under Hyperthermic Conditions: Theory and In Vitro Experiments, " Journal of Biomechanical Engineering,” 130, pp. 0410161–10., Submitted.
B. M. and Hoffmann, A., “(2010),” Understanding the Temporal Codes of Intra-Cellular Signals, Curr Opin Genet Dev, vol. 20, pp. 684–93, Submitted.
A. Peairs, Dai, R., Gan, L., Shimp, S., Rylander, M. N., Li, L., and Reilly, C. M., “2010, "Epigallocatechin-3-gallate (EGCG) attenuates inflammation in MRL/lpr mouse mesangial cells, " Cellular Molecular Immunolology,” vol. 7, pp. 123–32, Submitted.
J. W. Fisher, Buchanan, C. F., Szot, C., Sarkar, S., Rylander, C., and Rylander, M. N., “2010, "Photothermal Response of RENCA and PC3 Cells to Multi-walled Carbon Nanotubes and 1064 nm Laser Irradiation, " Cancer Research,” 70, vol. 23, pp. 1–10, Submitted.
S. Sarkar, Rylander, C. G., and Rylander, M. N., “2010, "Photothermal Response of Tissue Phantoms Containing Multi-walled Carbon Nanotubes: Modified Optical and thermal properties, " Journal of Biomechanical Engineering,” Submitted.
J. M., Errede, B., Behar, M., Mather, W., Nayak, S., Hasty, J., Dohlman, H. G., and Elston, T., “(2011),” Saccharomyces cerevisiae dynamically modifies pheromone gradients to achieve better mating efficiency, {Sci} {Signal}, Submitted.
B. S., Behar, M., and Hoffmann, A., “(2012),” Lessons from modeling the {NFkB} pathway, {Immunol} {Rev}, vol. 246, pp. 221–38, Submitted.
M. SP, M, B., HA, B., A, H., PE, W., and others,(2013),” Analysis of the {RelA}:CBP/p300 Interaction Reveals {NF}-κB-Driven Transcription, {PLoS} Biol, Submitted.
B. M and Hoffmann, A., “(2103) Tunable Signal Processing through a kinase control cycle: the IKK signaling node,” Biophys. J, vol. 105, pp. 231–41, Submitted.
T. Bui-Thanh and Ghattas, O., “Bayes is Optimal,” ICES Report, vol. 15, no. 04, Submitted.
B. G. Thengvall, Bard, J. F., and Yu, G., “A Bundle Algorithm for the Aircraft Schedule Recovery Problem During Hub Closures,” Transportation Science, vol. 37, pp. 392–407, Submitted.
E. M. Carter, Jackson, M. C., Katz, L. E., and Speitel Jr, G. E., “A Coupled Sensor-Spectrophotometric Device for Continuous Measurement of Formaldehyde in Indoor Environments,” Journal of Exposure Science and Environmental Epidemiology, Submitted.
T. Bui-Thanh and Lan, S., “Emulation of higher-order tensors in manifold Monte Carlo methods for Bayesian Inverse Problems,” Submitted.
A. I. Z. Jarrah, Bard, J. F., and deSilva, A. H., “Equipment Selection and Machine Scheduling in General Mail Facilities (1994),” Management Science, vol. 40, pp. 1049–1068, Submitted.
T. Bui-Thanh, “FEM-Based Discretization-Invariant MCMC Methods for PDE-constrained Bayesian Inverse Problems,” Submitted.